PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc01963.1.g00100.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 450aa    MW: 49304.8 Da    PI: 6.5124
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc01963.1.g00100.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.75.5e-19123191259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT........EEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk........vveitYegeHnhe 59 
                                   +Dgy+WrKYG K ++g++f+rsY+rC+++   gC ++k v+++++d++        v+++tY+++H+++
  Zpz_sc01963.1.g00100.1.am.mk 123 EDGYEWRKYGEKRINGAQFTRSYFRCAYKddtGCLATKYVQQTQDDGNnntvveppVFQVTYNNDHTCK 191
                                   7***************************99999**********998754444444478999*****997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-20111191IPR003657WRKY domain
SuperFamilySSF1182901.44E-18116191IPR003657WRKY domain
SMARTSM007744.9E-27122192IPR003657WRKY domain
PROSITE profilePS5081115.824123168IPR003657WRKY domain
PfamPF031065.8E-22123191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MPVDDCDGAV REVAQVYELI KTKLPLFLLQ RRHGQQEQPP ATTTTSLLSE ALRALNIALS  60
TMTTMQKQQQ QHQLEITSPA PAAAGSGNGA TTSVKRRRSS VLTEGGRKNS SSSWVNLTTV  120
PYEDGYEWRK YGEKRINGAQ FTRSYFRCAY KDDTGCLATK YVQQTQDDGN NNTVVEPPVF  180
QVTYNNDHTC KCAAATSAAS SAMEEENINK IPTTGPPPPP PGGDHTDVAM DMVPKEEETV  240
VGVLRPLADV SVEEDSSFFR SSCNELDMAR IMAESLMGDD PELQLLYNTF NPSKIQSFSS  300
APFLRVPFHR RLPAPSVPGT NQARQPSLIE LNPQLLPLPA VDRSVGFRSA GAMLRLLVCA  360
LFLLGGCHGR FVVEKNSLNV TAPEDLKGTY ECAIGNFGVP QYGGTMVGFV AYPKANRKAC  420
KDFDDFDISY KAKPGAFLAR RQGNVMFEVI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4tjv_A5e-30370449385Vacuolar-sorting receptor 1
4tjx_A5e-30370449385Vacuolar-sorting receptor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0675001e-86BT067500.1 Zea mays full-length cDNA clone ZM_BFc0068H05 mRNA, complete cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50452663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.12e-16WRKY DNA-binding protein 38